Details for gene set V$CRX

Table: GSEA Results Summary

Dataset	RNR_GSEA_DESEQ2_FC
Phenotype	NoPhenotypeAvailable
Upregulated in class	na_neg
GeneSet	V$CRX_Q4
Enrichment Score (ES)	-0.10965987
Normalized Enrichment Score (NES)	-2.1065762
Nominal p-value	0.001996008
FDR q-value	0.056370042
FWER p-Value	0.533

Table: GSEA details [plain text format]
	PROBE	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	SST	144	1.881	-0.0040	No
2	KRT24	189	1.556	-0.0025	No
3	ATRNL1	326	1.146	-0.0061	No
4	GDF7	336	1.127	-0.0027	No
5	TNFSF11	341	1.121	0.0009	No
6	LEMD1	372	1.060	0.0031	No
7	ADAMTSL1	385	1.037	0.0063	No
8	HRK	388	1.032	0.0100	No
9	FIBCD1	429	0.985	0.0117	No
10	LRRTM4	479	0.936	0.0129	No
11	ASCL4	522	0.866	0.0144	No
12	OTOP3	614	0.756	0.0133	No
13	IRX5	643	0.732	0.0157	No
14	POU6F2	672	0.708	0.0180	No
15	GLRA1	717	0.667	0.0194	No
16	FRMPD2	816	0.614	0.0179	No
17	AKAP2	822	0.611	0.0215	No
18	NRXN3	955	0.545	0.0182	No
19	CARTPT	1008	0.513	0.0192	No
20	TNNT1	1031	0.502	0.0218	No
21	NR1H4	1043	0.499	0.0251	No
22	HOXC5	1220	0.435	0.0193	No
23	C11orf88	1252	0.423	0.0215	No
24	FGF14	1261	0.421	0.0249	No
25	ETV5	1310	0.401	0.0262	No
26	ESM1	1320	0.398	0.0295	No
27	CFB	1631	0.322	0.0165	No
28	ZPBP2	1634	0.322	0.0202	No
29	CREB5	1659	0.318	0.0228	No
30	CPEB4	1740	0.303	0.0222	No
31	SYNE1	1975	0.264	0.0134	No
32	MN1	2003	0.261	0.0157	No
33	MIP	2025	0.259	0.0184	No
34	AMHR2	2110	0.249	0.0177	No
35	KCNA1	2150	0.245	0.0194	No
36	PDE4D	2239	0.235	0.0185	No
37	RORA	2270	0.231	0.0207	No
38	DMD	2280	0.230	0.0241	No
39	SAMD11	2380	0.219	0.0225	No
40	SOAT2	2424	0.216	0.0240	No
41	EYA4	2479	0.211	0.0249	No
42	SOX15	2492	0.210	0.0281	No
43	JMJD1C	2530	0.208	0.0300	No
44	ABI3BP	2559	0.205	0.0323	No
45	ID2	2578	0.204	0.0351	No
46	MYO3B	2654	0.197	0.0349	No
47	USP34	2707	0.193	0.0359	No
48	NIPBL	2821	0.184	0.0336	No
49	NCOA2	2824	0.183	0.0374	No
50	NOTCH2	2857	0.182	0.0395	No
51	MED13	2873	0.180	0.0425	No
52	NEO1	2876	0.180	0.0462	No
53	TYRP1	2950	0.175	0.0461	No
54	CLASP1	2951	0.175	0.0499	No
55	LIFR	3068	0.169	0.0475	No
56	SATB1	3111	0.166	0.0490	No
57	EFHB	3387	0.151	0.0379	No
58	LTBP1	3439	0.149	0.0390	No
59	MCTP2	3456	0.148	0.0420	No
60	MTMR10	3458	0.148	0.0457	No
61	PURA	3473	0.147	0.0488	No
62	TLE4	3652	0.138	0.0430	No
63	NOTCH2NL	3713	0.135	0.0436	No
64	NLGN1	3765	0.133	0.0446	No
65	MAML3	3801	0.131	0.0466	No
66	GNB3	3852	0.128	0.0477	No
67	LPHN2	3931	0.125	0.0473	No
68	DAP	3933	0.125	0.0511	No
69	IGSF3	3955	0.124	0.0538	No
70	LYPD2	3966	0.124	0.0571	No
71	PRRX1	4109	0.118	0.0532	No
72	BTRC	4138	0.117	0.0555	No
73	CASK	4140	0.117	0.0593	No
74	RIMS1	4225	0.114	0.0586	No
75	NDUFAF3	4444	0.107	0.0506	No
76	ZNF281	4494	0.105	0.0518	No
77	SLC5A2	4636	0.100	0.0479	No
78	CNOT4	4838	0.093	0.0408	No
79	PALM2	4953	0.090	0.0385	No
80	ZBTB20	5045	0.087	0.0374	No
81	ATP1B3	5047	0.087	0.0412	No
82	ZBTB4	5107	0.086	0.0418	No
83	CHD2	5153	0.085	0.0432	No
84	HMGN2	5160	0.084	0.0467	No
85	MAB21L1	5277	0.081	0.0442	No
86	MIER1	5287	0.081	0.0476	No
87	DPYD	5372	0.079	0.0469	No
88	RBM39	5375	0.079	0.0506	No
89	AGA	5518	0.075	0.0467	No
90	SLC13A4	5543	0.074	0.0493	No
91	MOAP1	5550	0.074	0.0528	No
92	DLC1	5679	0.070	0.0497	No
93	CHORDC1	5710	0.070	0.0519	No
94	C5	5772	0.068	0.0524	No
95	UBAP2L	6017	0.062	0.0430	No
96	FAM122A	6123	0.059	0.0411	No
97	ERBB4	6124	0.059	0.0450	No
98	PRKAG1	6144	0.059	0.0478	No
99	FGF7	6233	0.057	0.0468	No
100	E2F3	6326	0.055	0.0457	No
101	ABLIM1	6378	0.053	0.0467	No
102	ARHGAP35	6595	0.049	0.0388	No
103	ESRRG	6619	0.048	0.0414	No
104	FZD4	6628	0.048	0.0448	No
105	SLC1A7	6802	0.044	0.0392	No
106	CLMP	6862	0.043	0.0399	No
107	ANXA11	6924	0.041	0.0404	No
108	ECHDC2	6936	0.041	0.0437	No
109	JARID2	7034	0.039	0.0422	No
110	DMPK	7125	0.037	0.0412	No
111	TEX2	7143	0.036	0.0441	No
112	GPBP1	7225	0.035	0.0435	No
113	CAMK2A	7397	0.031	0.0381	No
114	SARNP	7490	0.029	0.0369	No
115	LDB2	7578	0.027	0.0360	No
116	TCF7L2	7794	0.023	0.0282	No
117	GSTCD	7813	0.023	0.0310	No
118	MDGA1	7878	0.021	0.0314	No
119	EGFLAM	7999	0.019	0.0287	No
120	NR2F1	8147	0.016	0.0245	No
121	MSH5	8258	0.014	0.0224	No
122	AMMECR1	8290	0.013	0.0246	No
123	INTS12	8297	0.013	0.0281	No
124	STAT5B	8345	0.012	0.0294	No
125	CRYGS	8362	0.012	0.0323	No
126	LMO3	8462	0.010	0.0308	No
127	CTBP2	8930	0.000	0.0092	No
128	ZNF384	9009	-0.001	0.0088	No
129	TRIP10	9035	-0.002	0.0113	No
130	RPA3	9158	-0.004	0.0085	No
131	C20orf112	9170	-0.005	0.0118	No
132	KHSRP	9243	-0.006	0.0117	No
133	RPS6KA3	9328	-0.008	0.0110	No
134	C6orf62	9413	-0.009	0.0102	No
135	SRPK2	9491	-0.010	0.0099	No
136	POLD4	9627	-0.014	0.0064	No
137	MEPCE	9666	-0.014	0.0082	No
138	CNTLN	9674	-0.015	0.0116	No
139	C8orf46	10007	-0.020	-0.0026	No
140	WDR78	10113	-0.023	-0.0045	No
141	NFIX	10312	-0.026	-0.0114	No
142	PCDHGC3	10506	-0.030	-0.0181	No
143	NKX6-1	10598	-0.032	-0.0192	No
144	AKIRIN2	10727	-0.035	-0.0223	No
145	MBD6	10850	-0.038	-0.0251	No
146	RTN2	10991	-0.041	-0.0288	No
147	UPRT	11127	-0.045	-0.0324	No
148	CYTH2	11308	-0.049	-0.0383	No
149	FLRT1	11319	-0.049	-0.0350	No
150	SSBP2	11439	-0.052	-0.0376	No
151	PTMS	11481	-0.053	-0.0360	No
152	DCTN1	11613	-0.056	-0.0393	No
153	GPR21	11630	-0.056	-0.0363	No
154	GAP43	11679	-0.058	-0.0351	No
155	ROBO3	12000	-0.065	-0.0487	No
156	MEOX2	12037	-0.066	-0.0468	No
157	DALRD3	12125	-0.068	-0.0477	No
158	POLR2A	12127	-0.068	-0.0439	No
159	ENTPD1	12440	-0.076	-0.0570	No
160	CDK2AP2	12693	-0.083	-0.0669	No
161	MERTK	12774	-0.085	-0.0674	No
162	TMUB2	12915	-0.089	-0.0712	No
163	EFS	12949	-0.090	-0.0691	No
164	ZFP36L2	13288	-0.101	-0.0837	No
165	PPM1N	13373	-0.104	-0.0844	No
166	ACAA2	13649	-0.113	-0.0955	No
167	TMEM35	13658	-0.114	-0.0921	No
168	ANGPTL2	13890	-0.123	-0.1008	No
169	PGF	13969	-0.126	-0.1012	No
170	PAX6	13970	-0.126	-0.0974	No
171	HOXB3	14009	-0.128	-0.0956	No
172	BMI1	14034	-0.130	-0.0931	No
173	BCL11A	14182	-0.137	-0.0972	No
174	SLC9B2	14192	-0.138	-0.0939	No
175	RUNX3	14483	-0.153	-0.1058	Yes
176	DLG4	14501	-0.154	-0.1029	Yes
177	CDKN2C	14522	-0.154	-0.1001	Yes
178	CCDC129	14553	-0.156	-0.0979	Yes
179	HIST1H1C	14564	-0.157	-0.0946	Yes
180	FLNC	14623	-0.160	-0.0939	Yes
181	RAB33A	14629	-0.160	-0.0904	Yes
182	ACADVL	14647	-0.161	-0.0874	Yes
183	ERG	14670	-0.162	-0.0848	Yes
184	TSC22D1	14758	-0.168	-0.0857	Yes
185	WNT6	14767	-0.169	-0.0823	Yes
186	KCNH2	14789	-0.170	-0.0796	Yes
187	MSX2	14821	-0.173	-0.0774	Yes
188	FNDC9	14861	-0.176	-0.0757	Yes
189	MEIS1	14915	-0.179	-0.0747	Yes
190	TIGD2	14944	-0.181	-0.0724	Yes
191	NAA60	15196	-0.201	-0.0822	Yes
192	BNC2	15291	-0.209	-0.0835	Yes
193	VASP	15310	-0.210	-0.0806	Yes
194	RALGPS2	15346	-0.213	-0.0787	Yes
195	TNFSF4	15385	-0.217	-0.0769	Yes
196	GPX1	15398	-0.218	-0.0737	Yes
197	SATB2	15412	-0.219	-0.0706	Yes
198	RPRML	15511	-0.229	-0.0721	Yes
199	ETS2	15520	-0.230	-0.0686	Yes
200	EGFL6	15557	-0.233	-0.0668	Yes
201	CYP2F1	15574	-0.235	-0.0638	Yes
202	HNF1A	15720	-0.252	-0.0678	Yes
203	NR6A1	15739	-0.255	-0.0650	Yes
204	HR	15777	-0.260	-0.0631	Yes
205	ATP6V0A4	15925	-0.278	-0.0673	Yes
206	CACNA2D4	15928	-0.279	-0.0636	Yes
207	MOCOS	15973	-0.284	-0.0621	Yes
208	HOXA3	16054	-0.293	-0.0626	Yes
209	UBXN10	16102	-0.300	-0.0613	Yes
210	CLDN2	16142	-0.307	-0.0596	Yes
211	BTG4	16150	-0.309	-0.0561	Yes
212	DEF6	16237	-0.324	-0.0570	Yes
213	HOXC4	16246	-0.326	-0.0536	Yes
214	FOXB1	16435	-0.361	-0.0599	Yes
215	TKT	16436	-0.362	-0.0561	Yes
216	TCF7	16459	-0.367	-0.0535	Yes
217	BHLHE22	16471	-0.370	-0.0502	Yes
218	LLGL2	16497	-0.377	-0.0477	Yes
219	C12orf50	16499	-0.377	-0.0439	Yes
220	PITX2	16527	-0.383	-0.0415	Yes
221	DSG4	16541	-0.386	-0.0384	Yes
222	SPTSSB	16550	-0.388	-0.0350	Yes
223	ZNF385A	16648	-0.410	-0.0364	Yes
224	GUCY2D	16779	-0.447	-0.0397	Yes
225	RAX	16828	-0.462	-0.0384	Yes
226	GUCY2F	16976	-0.498	-0.0426	Yes
227	TLX3	17125	-0.545	-0.0468	Yes
228	DMRT2	17151	-0.556	-0.0443	Yes
229	HOXC6	17200	-0.579	-0.0431	Yes
230	TULP1	17299	-0.628	-0.0446	Yes
231	GRID2	17382	-0.669	-0.0452	Yes
232	NOS1	17389	-0.675	-0.0417	Yes
233	SLC6A20	17443	-0.699	-0.0407	Yes
234	SLC12A5	17569	-0.778	-0.0437	Yes
235	C3orf27	17606	-0.810	-0.0418	Yes
236	SIX3	17694	-0.883	-0.0427	Yes
237	ABCC6	17701	-0.886	-0.0391	Yes
238	SLC6A5	17702	-0.888	-0.0353	Yes
239	PCSK1	17781	-0.949	-0.0357	Yes
240	BDKRB1	17835	-0.987	-0.0347	Yes
241	GJD2	17856	-1.000	-0.0320	Yes
242	KRT3	17893	-1.034	-0.0301	Yes
243	HOXD10	17904	-1.044	-0.0268	Yes
244	KCNIP2	17922	-1.058	-0.0239	Yes
245	LIN28A	17979	-1.108	-0.0231	Yes
246	GRIN2B	18050	-1.185	-0.0230	Yes
247	LRIT1	18054	-1.188	-0.0194	Yes
248	PAX7	18092	-1.226	-0.0175	Yes
249	PITX1	18105	-1.248	-0.0143	Yes
250	HIST1H4C	18155	-1.345	-0.0131	Yes
251	PRDM13	18199	-1.443	-0.0116	Yes
252	FOXA1	18243	-1.500	-0.0101	Yes
253	SLITRK1	18296	-1.583	-0.0091	Yes
254	PROK2	18307	-1.613	-0.0058	Yes
255	FOXG1	18320	-1.644	-0.0026	Yes
256	KRT4	18412	-2.038	-0.0037	Yes
257	KRT2	18413	-2.044	0.0001	Yes
258	WNT3A	18460	-2.226	0.0015	Yes
259	NR2E1	18556	-4.229	0.0001	Yes
260	TRIML1	18575	-5.830	0.0030	Yes